This study assessed aquifer-river interaction using a combination of geological, hydrological, environmental stable isotope, and hydrochemical data in a non-perennial river system in the Heuningnes catchment. Results showed the depth to groundwater levels ranging from 3 to 10 m below ground level and aquifer transmissivity values of 0.17 to 1.74 m2 /day. The analytical data indicated that Na-Cl-type water dominates most groundwater and river water samples. Environmental stable isotope data of river samples in upstream areas showed depleted δ18O (-4.3 to -5.12 ‰) and δ2H (-22.9 to -19.3 ‰) signatures similar to the groundwater data, indicating a continuous influx of groundwater into the river water. Conversely, high evaporative enrichment of δ18O (1.13 to 7.08 ‰) and δ2H (38.8 to 7.5 ‰) were evident in downstream river samples.
It is evident from the local geological structures that the fault in the northeastern part of the study area passing Boskloof most likely acts as a conduit to groundwater flow in the NE-SW direction, thereby supplying water to upstream river flow. In contrast, the Bredasdorpberge fault likely impedes groundwater flow, resulting in hydraulic discontinuity between upstream and downstream areas. Relatively low conductive formation coupled with an average hydraulic gradient of 8.4 × 10−4 suggests a slow flow rate, resulting in less flushing and high groundwater salinisation in downstream areas. The results underscore the significance of using various data sets to understand groundwater-river interaction, providing a relevant water management platform for managing non-perennial river systems in water-stressed regions.